Lesa's course directory

Previous version of this course (Fall 2022)
Instructor
Contact Information:
Professor Lesa Hoffman
(she/her—you can call me Lesa)

Educational Measurement and Statistics
Email: Lesa-Hoffman@UIowa.edu (preferred contact)
Office: 356 South LC (mostly unattended)
Phone: 319-384-0522 (mostly unattended)
Home Department Information: Psychological and Quantitative Foundations (PSQF)
Office: South 361 Lindquist Center
DEO: Professor Martin Kivlighan
Course Location
and Time:

Instructor Office Hours:


Zoom Link for Class and Office Hours:
166 North Lindquist Center or via zoom
Tuesdays and Thursdays 12:30–1:45 PM


Mondays and Wednesdays 3:00–4:30 PM in an online group format via zoom (first-come, first-serve) or individually by appointment

https://uiowa.zoom.us/my/lesahoffmaniowa
Meeting ID: 5044356512; Mobile Access: +13126266799
(please use your real name as your account name to be admitted)
Graduate Teaching Assistant Contact Information and Office Hours: Geraldo "Bladimir" Padilla (he/him)
PhD student in Educational Measurement and Statistics in PSQF
Email: Geraldo-Padilla@UIowa.edu
Office hours in a hybrid format: Thursdays 11:00–11:59 AM and Fridays 9:00–11:00 AM in N476 LC or via zoom: https://uiowa.zoom.us/my/bladimirpadilla

Nikki "Ten" Tennessen (she/her)
PhD candidate in Higher Education and Student Affairs in EPLS
PhD student in Educational Measurement and Statistics in PSQF
Email: Nicole-Tennessen@UIowa.edu
Office hours in an online format: Tuesdays and Thursdays 2:00–3:30 PM via zoom: https://uiowa.zoom.us/j/98669737217?pwd=1r3U8TeGPlENTlYF2WU5s58Ick6zMz.1
Coursework
Access:
ICON for Formative Assessments

U Iowa Virtual Desktop Software

Online Homework System (now available!)

For help getting started with the online homework system, Virtual Desktop, STATA, or R, please see the videos and handouts posted 9/3 and 9/16 for PSQF 6243
Textbook and Supplemental Materials:


Program Documentation and Resources (to be updated throughout):
- Longitudinal Analysis: Modeling Within-Person Fluctuation and Change
- Full syntax examples at PilesOfVariance.com
- Lesa's SAS guide from PilesOfVariance.com

- SAS PROC MIXED Online Manual

- Lesa's Stata guide from PilesOfVariance.com
- STATA MIXED Online Manual

- R: TeachingDemos package, HAVEN package, READXL package, LM, MULTCOMP package, EMMEANS package, PREDICTION package, GLS and LME (within NLME package), MMRM package, LMER (within LME4 package), LMERTEST package, LAVAAN package

Schedule of Events (Printable Syllabus: last updated 8/28/24)

Week Number

Weekday and Date

Topics and Course Materials

Readings for
Each Topic

1 M: 8/26 NO HOMEWORK (HW) OR FORMATIVE ASSESSMENTS (FA) DUE
NO LESA OFFICE HOURS TODAY
 
T: 8/27 Lecture 1: Introduction to the Course and Multilevel Models for Longitudinal Data (updated 8/24/24)
Video Part 1: Lecture 1-9
Hoffman (2015) ch. 1
Willett (1989)
R: 8/29 Lecture 1, continued
Video Part 2: Lecture 10-26

Unit 2: Review of General Linear Models --
review PSQF 6270 Lecture 1 and Example 1 on your own as needed


Hoffman (2015) ch. 2
       
2 M: 9/2 NO HW OR FA DUE; NO LESA OFFICE HOURS TODAY  
T: 9/3 Lecture 3: Introduction to Within-Person Analysis and RM ANOVA
Example 3a: Between vs. Within-Person Models
Example 3a Files (.zip folder of data, syntax, and output)
Video Part 1: Lecture 3 (slides 1-15) and Example 3a (pages 1-6)
Hoffman (2015) ch. 3
R: 9/5 Example 3a, continued
Video Part 2: Lecture 3 slides 16-17 and Example 3a pages 1-9
Castro-Schilo & Grimm (2018)
       
3 M: 9/9 HW0 (online, for 2 points extra credit, over the syllabus) DUE BY 11:59 PM  
T: 9/10 Lecture 3, continued
Video Part 3: Lecture 3 slides 18-31
 
R: 9/12 MEET ON ZOOM ONLY TODAY
Example 3b: Kinds of Analysis of Variance (ANOVA) models
Example 3b Files (.zip folder of data, syntax, and output)
Video: Example 3b (all)



       
4 M: 9/16 FA1 (Quiz in ICON) DUE BY 11:59 PM  
T: 9/17 Discussion of FA1
Lecture 4 and Example 4: Describing Within-Person Fluctuation over Time via ACS Models (updated 9/26)
Example 4 Files (.zip folder of syntax and output and excel LRTs)
Video Part 1: Discussion of FA1 and Lecture 4 slides 1-7
Hoffman (2015) ch. 4
R: 9/19 NO TENNESSEN OFFICE HOURS TODAY
Lecture 4 and Example 4, continued
Video Part 2: Lecture 4 slides 6-13 and Example 4 pages 1-5
 
       
5 M: 9/23 FA2 (Quiz in ICON) !!! NOW DUE WED 9/25 !!! BY 11:59 PM  
T: 9/24 Lecture 4 and Example 4, continued
Video Part 3: Lecture 4 slides 3, 11-13, 15-18; Example 4 pages 1-11
 
R: 9/26 MEET ON ZOOM ONLY TODAY
Video Part 4: Discussion of FA2 and Review
Spreadsheet built in class (finished offline)
Bonus slides for continuous time AR1

       
6 M: 9/30 HW1 (online, based on Lectures 3–4) !!! NOW DUE WED 10/2 !!! BY 11:59 PM  
T: 10/1 TENNESSEN OFFICE HOURS END AT 3 PM TODAY
Lecture 4 and Example 4, continued
Video Part 5: Lecture 4 slides 19-31 and Example 4 pages 9-19

Lecture 5: Introduction to Random Effects of Time and Model Estimation
Video Part 1: Lecture 5 slides 1-12
Hoffman (2015) ch. 5
Enders (2010) ch. 3–5
McNeish (2017)
R: 10/3 NO TENNESSEN OFFICE HOURS TODAY
Lecture 5, continued
Example 5: Fixed and Random Effects of Time for Within-Person Change
Example 5 Files (.zip folder of data, syntax, and output)
Video Part 2: Lecture 5 slides 11-14 and Example 5 pages 1-9
Stoel et al. (2006)
McNeish & Matta (2018)
       
7 M: 10/7 NO HW OR FA DUE  
T: 10/8 NO CLASS TODAY; NO LESA OFFICE HOURS WEDNESDAY
2022 Video Part 2: watch 7:08 to 17:03 for Lecture 5 slides 15-20
2022 Video Part 3: watch 3:30 to 24:09 for Lecture 5 slides 21-25
 
R: 10/10 NO CLASS TODAY
2022 Video Part 4: watch 23:21 to end for Lecture 5 slides 25-51
2022 Video Part 5: Lecture 5 slides 53-70
2022 Video Part 6: Example 5 pages 16-26 to show how longitudinal models can also be estimated as single-level structural equation models (off by one page relative to current version)
 
       
8 M: 10/14 FA3 (Assignment in ICON) DUE BY 11:59 PM: Practice with MLM Notation  
T: 10/15 Discussion of FA3; Lecture 5 and Example 5, continued
FA3 Answer Key
Video Part 3: Discussion of FA3; Lecture 5 slides 39-41 and 36-38
 
R: 10/17 Lecture 5 and Example 5, continued
Video Part 4: Example 5 pages 4-15 and Lecture 5 slides 26-34
 
       
9 M: 10/21 HW2 (online, based on Example 5) !!! NOW DUE WED 10/23 !!! BY 11:59 PM Steps for doing HW
T: 10/22 Lecture 6: Describing Within-Person Change
Example 6a: Modeling Change over Time Using Polynomial Trends
Example 6 Files (.zip folder of data, syntax, output, and Excel spreadsheets; updated 10/27/24)
Video Part 1: Example 6 pages 1-8 and Lecture 6 sides 1-15
Hoffman (2015) ch. 6
R: 10/24 MEET ON ZOOM ONLY TODAY
Lecture 6 and Example 6a, continued
Video Part 2: Lecture 6 slides 11-24 and Example 6a pages 9-15
 
       
10 M: 10/28 FA4 (Quiz in ICON) DUE BY 11:59 PM  
T: 10/29 Discussion of FA4 (references); FA4 Help Spreadsheet
V Matrix Help Spreadsheet
Lecture 6 and Example 6a, continued
Example 6b: Modeling Change over Time Using Piecewise Trends
Video Part 1: Discussion of FA4; Lecture 6 slides 25-31
McNeish et al. (2023)
Tuliao et al. (2017)
R: 10/31 Lecture 6 and Example 6b, continued
Video Part 2: Lecture 6 slides 29-33 and Example 6b all
 
       
11 M: 11/4 HW3 (online, based on Example 6a) DUE BY 11:59 PM  
T: 11/5 Lecture 6 and Example 6b, continued
Example 6d: Modeling Change over Time Using Log Time to Approximate Exponential Trends
Video Part 1: Lecture 6 slides 4-9, 26-31, and 34-41; Example 6c select models; Example 6d pages 1-11
 
R: 11/7 Lecture 6 and Example 6d, continued (and some of Lecture 5)
Video Part 2: Lecture 6 slides 10 and 27, Example 6d pages 4-13, Lecture 5 slides 44-50, and Lecture 6 slides 43-45

Example 6c
: Modeling Change over Time with Truly Exponential Models
Video: Example 6c (pages 1-9, recorded outside of class in 2021)


Johnson & Hancock (2019)
Preacher & Hancock (2015)
       
12 M: 11/11 FA5 (Quiz in ICON) DUE BY 11:59 PM  
T: 11/12 Discussion of FA5
Lecture 7a: Review of Unconditional Models of Time
Video: Discussion of FA5; Lectuer 7a (all)
Walters & Hoffman (2017)
R: 11/14 Lecture 7b: Time-Invariant Predictors in Longitudinal Models
Video Part 1: Lecture 7b slides 1-18
Hoffman (2015) ch. 7
       
13 M: 11/18 HW4 (online, based on Example 6b) DUE BY 11:59 PM  
T: 11/19 NO TENNESSEN OFFICE HOURS TODAY
Lecture 7b, continued
Example 7b: Time-Invariant Predictors in Longitudinal Models
Example 7b Files (.zip folder of data, syntax, output, and Excel spreadsheet)
Video Part 2: Lecture 7b slide 9 and 14-23; Example 7b pages 1-7
 
R: 11/21 Lecture 7b and Example 7b, continued Rights & Sterba (2019, 2020)
       
14 M: 11/25 NO CLASS NOR ANY OFFICE HOURS THIS WEEK  
T: 11/26 NO CLASS NOR ANY OFFICE HOURS THIS WEEK  
R: 11/28 NO CLASS NOR ANY OFFICE HOURS THIS WEEK  
       
15 M: 12/2 FA6 (Quiz in ICON) DUE BY 11:59 PM  
T: 12/3 Discussion of FA6; Example 7b, continued Arend & Schäfer (2019)
R: 12/5 Example 7b, continued Timmons & Preacher (2015)
       
16 M: 12/9 FA7 (Quiz in ICON) !!! NOW DUE WED 12/11 !!! BY 11:59 PM  
T: 12/10 Example 7b, continued  
R: 12/12 Discussion of FA7 and More Stories  
       
17 M: 12/16 Lesa office hours from 3:00–4:30 PM  
T: 12/17 NO CLASS, but Lesa office hours from 12:30–3:30 PM  
W: 12/18 Lesa office hours from 3:00–4:30 PM  
R: 12/19 NO CLASS, but Lesa office hours from 12:30–3:30 PM
HW5 (online, based on Example 7b) DUE BY 11:59 PM
ALL OUTSTANDING WORK MUST BE COMPLETED BY 11:59 PM
 

Planned Schedule of Topics and Events:

This course will meet synchronously in person and on zoom. The planned schedule of topics and events may need to be adjusted throughout the course. The online syllabus above will always have the most current schedule and corresponding due dates (i.e., the printable syllabus will not be updated unless noted).

Course Objectives, Prerequisites, and Materials:

This course will illustrate the uses of multilevel models (i.e., general linear mixed-effect models, hierarchical linear models) for the analysis of longitudinal (repeated measures) data. The course objective is for participants to be able to complete all the necessary steps in a longitudinal analysis involving time-invariant predictors: deciding which type of model is appropriate, restructuring the data and creating predictor variables, evaluating fixed and random effects and/or alternative covariance structures, predicting multiple sources of variation, and interpreting and presenting empirical findings. Prior to enrolling, participants should be comfortable with general linear models (e.g., regression, ANOVA), such as is covered in PSQF 6243.

Class time will be devoted primarily to lectures, examples, and spontaneous review, the materials for which will be available for download above. Readings and other resources have been suggested for each topic and may be updated later. Synchronous attendance (in person or via zoom) is encouraged but not required, and you do not need to notify the instructor of a single class absence. Video recordings of each class will be available on YouTube so that closed captioning will be provided, and supplemental videos for specific topics (e.g., software demos) may be added as well. Auditors and visitors are always welcome to attend class. No required class sessions will be held outside the regular class time noted above (i.e., no additional midterm or final exam sessions). However, because the course will have an applied focus requiring the use of statistical software, participants are encouraged to attend group-based office hours (first-come, first-served), in which multiple participants can receive assistance on homework assignments simultaneously.

Course Requirements:

Participants can earn up to 100 total points by completing work outside of class. Up to 86 points can be earned from submitting homework assignments (HW; 5 planned initially) through a custom online system—these will be graded for accuracy. Up to 14 points may be earned from submitting formative assessments (FA; 7 planned initially); these will be graded for effort only—incorrect answers will not be penalized. Participants may earn up to 2 extra credit points for completing homework 0; there may be other opportunities to earn extra credit at the instructor's discretion. Finally, revisions to the planned course schedule and/or content may result in fewer homework assignments and formative assessments (and thus fewer total points) at the instructor's discretion. If that happens, this syllabus will be updated to reflect the new point totals.

Policy on Accepting Late Work and Grades of Incomplete:

Participants may submit work at any point during the semester to be counted towards their course grade. However, in order to encourage participants to keep up with the class, late homework assignments will incur a 2-point penalty, and late formative assessments will incur a 1-point penalty (overall, not per day) . Extensions will be granted as needed for extenuating circumstances (e.g., conferences, comprehensive exams, family obligations) if requested at least two weeks in advance of the due date. A final grade of "incomplete" will only be given in dire circumstances and entirely at the instructor's discretion. All work must be submitted by Thursday, December 19, 2024, at 11:59 PM to be included in the course grade.

Final grades will be determined according to the percentage earned of the total possible points:

>96% = A+, 93–96% = A, 90–92% = A−, 87–89% = B+, 83–86% = B, 80–82% = B−, 77–79% = C+, 73–76% = C, 70–72% = C− (PASS), 67–69% = D+, 63–66% = D, 60–62% = D−, <60% = F

Course Software:

Participants will need to have access to statistical software—SAS, STATA, or R+Rstudio—that can estimate the models presented. Each of these programs are freely available to course participants in multiple ways:

Course Textbook:

Hoffman, L. (2015). Longitudinal analysis: Modeling within-person fluctuation and change. Routledge/Taylor & Francis. Available for free at the University of Iowa library in electronic form.

Academic Misconduct:

As a reminder, the University of Iowa College of Education has a formal policy on academic misconduct, which all students in this course are expected to follow. While students can work with each other to understand the course content, all homework assignments must ultimately be completed individually using the student-specific datasets provided for each assignment. Please consult the instructor if you have questions.

The use of ChatGPT or any other Artificial Intelligence (AI) should not be needed (or helpful), as the course materials will provide examples of all software code needed to complete homework assignments. Similarly, the use of AI in completing formative assessments (FAs) will defeat their purpose, as these structured reviews are designed to help participants recognize remaining sources of confusion or inexperience (and FA points will be given regardless, so long as there is some effort made in trying to answer each question).

Respect for Each Other:

The instructor wants ALL students to feel welcome and encouraged to participate in this course. There is no such thing as a “stupid” question (or answer). All course participants—enrolled students and auditing visitors—should always feel welcome to ask whatever questions will be helpful in helping them understand the course content. Questions or comments are welcome at any point during class (aloud or using the zoom chat window), in office hours, over email, or in individual appointments with the instructor (available by request). Students with disabilities or who have any special circumstances are encouraged to contact the instructor for a confidential discussion of their individual needs for academic accommodation.

All participants are welcome to attend class via zoom instead of in person for any reason at any time. If it possible that you have been exposed to COVID-19 or any other illness, please DO NOT attend class in person! Similarly, if the instructor has been exposed to illness or the weather prohibits safe travel to class, the course will move to a temporary zoom-only format to protect all course participants.

When using zoom, please provide the name you wish for us to call you inside your zoom account (i.e., so that it appears on your window while in use). Student use of cameras and microphones while on zoom is also encouraged but not required (out of respect for your privacy and/or limited internet). Please note that class video recordings posted to YouTube will NOT include any video from course participants (only the class audio and screen share from the instructor will be captured). Participants who do not wish for their audio to be captured can use the zoom chat window (which also allows for private direct messages to the instructor), even while attending in person.

The University of Iowa is committed to making the class environment (in person or online) a respectful and inclusive space for people of all gender, sexual, racial, religious, and other identities. Toward this goal, students are invited to optionally share the names and pronouns they would like their instructors and advisors to use to address them. The University of Iowa prohibits discrimination and harassment against individuals on the basis of race, class, gender, sexual orientation, national origin, and other identity categories. For more information, contact the Office of Civil Rights Compliance. Additional university guidelines about classroom behavior and other student resources are provided here, student complaint procedures are provided here, and the university acknowledgement of land and sovereignty is provided here.

Respect for The Rest of Your World:

The instructor realizes that this course is not your only obligation in your work or your life. While class attendance in real time is not mandatory, it is strongly encouraged because frequent review of the material will be your best strategy for success in this course. However, if work or life events may compromise your ability to succeed, please contact the instructor for a confidential discussion so that we can work together to make a plan for your success. Please do not wait until you are too far behind to try to catch up!

Other Course Readings (all available in ICON under "Files"):

Note—I know this is A LOT of readings, but we are covering a lot of material! I encourage you to prioritize reading the textbook, as it will map most closely onto what we cover in class. Then should come class participation and completing course work, followed by these extra readings as time permits (included to give you some additional background and/or exposure to current best-practices in each topic).

Arend, M. G., & Schäfer, T. (2019). Statistical power in two-level models: A tutorial based on Monte Carlo simulation. Psychological Methods, 24(1), 1–19. https://doi.org/10.1037/met0000195

Castro-Schilo, L., & Grimm, K. J. (2018). Using residualized change versus difference scores for longitudinal research. Journal of Social and Personal Relationships, 35(1), 32–58. https://doi.org/10.1177/0265407517718387

Enders, C. K. (2010; chapters 3–5). Applied missing data analysis. Guilford.

Johnson, T. L., & Hancock, G. R. (2019). Time to criterion latent growth models. Psychological Methods, 24(6), 690–707. https://doi.org/10.1037/met0000214

McNeish, D. (2017). Small sample methods for multilevel modeling: A colloquial elucidation of REML and the Kenward-Roger correction. Multivariate Behavioral Research, 52(5), 661–670. https://doi.org/10.1080/00273171.2017.1344538

McNeish, D., & Matta, T. (2018) Differentiating between mixed-effects and latent-curve approaches to growth modeling. Behavior Research Methods, 50, 1398–1414. https://doi.org/10.3758/s13428-017-0976-5

McNeish, D., Bauer, D. J., Dumas, D., Clements, D. H., Cohen, J. R., Lin, W., Sarama, J., & Sheridan, M. A. (2023). Modeling individual differences in the timing of change onset and offset. Psychological Methods, 28(2), 401–421.  https://doi.org/10.1037/met0000407

Preacher, K. J., & Hancock, G. R. (2015). Meaningful aspects of change as novel random coefficients: A general method for reparameterizing longitudinal models. Psychological Methods, 20(1), 84–101. https://doi.org/10.1037/met0000028

Rights, J. D., & Sterba, S. K. (2019). Quantifying explained variance in multilevel models: An integrative framework for defining R-squared measures. Psychological Methods, 24(3), 309–338. https://doi.org/10.1037/met0000184

Rights, J. D., & Sterba, S. K. (2020). New recommendations on the use of R-squared differences in multilevel model comparisons. Multivariate Behavioral Research, 55(4), 568–599. https://doi.org/10.1080/00273171.2019.1660605

Stoel, R. D., Garre, F. G., Dolan, C., & van den Wittenboer, G. (2006). On the likelihood ratio test in structural equation modeling when parameters are subject to boundary constraints. Psychological Methods, 11(4), 439–455. https://doi.org/10.1037/1082-989X.11.4.439

Timmons, A. C., & Preacher, K. J. (2015). The importance of temporal design: How do measurement intervals affect the accuracy and efficiency of parameter estimates in longitudinal research?  Multivariate Behavioral Research50(1), 41–55. https://doi.org/10.1080/00273171.2014.961056

Tuliao, A. P., Hoffman, L. , & McChargue, D. E. (2017). Measuring individual differences in responses to date-rape vignettes using latent variable models. Aggressive Behavior, 43(1), 60–73. https://doi.org/10.1002/ab.21662

Walters, R. W., & Hoffman, L. (2017). Applying the hierarchical linear model to longitudinal data / La aplicación del modelo lineal jerárquico a datos longitudinales, Cultura y Educación, 29(3), 666–701. https://doi.org/10.1080/11356405.2017.1367168

Willett, J.B. (1989). Some results on reliability for the longitudinal measurement of change: Implications for the design of studies of individual growth. Educational and Psychological Measurement, 49, 587–602. https://doi.org/10.1177%2F001316448904900309